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# Sample-wise correlation of cell type proportions to compare manual gating and cyCONDOR.

Source: `R/corr_plot_comparison.R`
`corr_plot_comparison.Rd`

'corr_plot_comparison' performs a sample-wise correlation of cell type proportions obtained via manual gating and via clustering on cyCONDOR. The result is shown in a correlogram.

## Usage

    corr_plot_comparison(
      condor_df,
      flowjo_df,
      sample_col,
      method_corr = "pearson",
      tl.cex = 1,
      cl.cex = 1
    )

## Arguments

condor_df

  data frame containing the cell type frequencies obtained via clustering and annotation in cyCONDOR.

flowjo_df

  data frame containing the cell type frequencies obtained via manual gating and annotation (e.g. FlowJo).

sample_col

  name of the column containing sample names. This column name needs to be matching between the two data frames.

method_corr

  correlation method used in the correlogram (default = "pearson").

tl.cex

  Numeric, for the size of text label (variable names).

cl.cex

  Numeric, text size of number-label in color-legend

## Details

corr_plot_comparison