Datasets

Latest additions:
2024-04-02
13:45
[DZNE-2024-00329] Dataset
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Dataset: HD-MEA n-Ephys for MEA-seqX Platform
Zenodo () [10.5281/ZENODO.10620559]
Raw data (.brw) was recorded with BrainWave SW and detected LFP events stored in (.bxr) for SD and ENR groups. These extracellular recordings were obtained from acute hippocampal-cortical slices and were collected at 14KHz/electrode sampling frequency..
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2024-02-29
10:43
[DZNE-2024-00229] Dataset
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Dataset: FastSurferVINN Checkpoints
Zenodo () [10.5281/ZENODO.10390572]
Training checkpoints for FastSurferVINN (https://github.com/Deep-MI/FastSurfer) - please cite the paper when using this resource (https://doi.org/10.1016/j.neuroimage.2022.118933).Leading neuroimaging studies have pushed 3T MRI acquisition resolutions below 1.0 mm for improved structure definition and morphometry. Yet, only few, time-intensive automated image analysis pipelines have been validated for high-resolution (HiRes) settings. [...]

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2024-02-29
10:42
[DZNE-2024-00228] Dataset
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Dataset: CerebNet Checkpoints
Zenodo () [10.5281/ZENODO.10390741]
Training checkpoints for CerebNet (https://github.com/Deep-MI/FastSurfer) - please cite the paper when using this resource (https://dx.doi.org/10.1016/j.neuroimage.2022.119703).Quantifying the volume of the cerebellum and its lobes is of profound interest in various neurodegenerative and acquired diseases. Especially for the most common spinocerebellar ataxias (SCA), for which the first antisense oligonculeotide-base gene silencing trial has recently started, there is an urgent need for quantitative, sensitive imaging markers at pre-symptomatic stages for stratification and treatment assessment. [...]
Fulltext: DZNE-2024-00228 (2) - Download fulltextPKL; DZNE-2024-00228 (3) - Download fulltextPKL; DZNE-2024-00228 (1) - Download fulltextPKL;

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2024-02-29
10:39
[DZNE-2024-00227] Dataset
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Dataset: HypVINN Checkpoints
Zenodo () [10.5281/ZENODO.10623892]
Training checkpoints for HypVINN (https://github.com/Deep-MI/FastSurfer) - please cite the paper when using this resource (https://doi.org/10.1162/imag_a_00034). Abstract The hypothalamus plays a crucial role in the regulation of a broad range of physiological, behavioral, and cognitive functions. [...]
Fulltext: DZNE-2024-00227 (3) - Download fulltextPKL; DZNE-2024-00227 (2) - Download fulltextPKL; DZNE-2024-00227 (1) - Download fulltextPKL;

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2024-02-29
10:29
[DZNE-2024-00226] Dataset
; ; ; et al
Dataset: HD-MEA n-Ephys for MEA-seqX Platform
Zenodo () [10.5281/ZENODO.10620558]
Raw data (.brw) was recorded with BrainWave SW and detected LFP events stored in (.bxr) for SD and ENR groups. These extracellular recordings were obtained from acute hippocampal-cortical slices and were collected at 14KHz/electrode sampling frequency..

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2024-02-29
10:27
[DZNE-2024-00225] Dataset
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Dataset: Spatial Transcriptomics Mouse Hippocampal Slices for MEA-seqX Platform
Zenodo () [10.5281/ZENODO.10626258]
Sequencing data (fastq.gz) was processed using the 10X Genomics Space Ranger Count pipeline. L75027 = Mouse_Hippocampus_SD L75031 = Mouse_Hippocampus_ENR Outputs include a spatial folder containing outputs that capture the spatiality of the data and a filtered_feature_bc matrix folder containing the tissue-associated barcodes in MEX format [...]
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2024-02-07
14:55
[DZNE-2024-00150] Dataset
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StimDisc
Visual Receptive Field Mapping ExperimentThis BIDS data set encompasses the data underlying the analyses reported in Heinzle et al. (2011) and Soch et al. [...]

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2024-02-07
11:10
OpenAccess [DZNE-2024-00145] Journal Article/Dataset
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Dataset: Autoantibody profiles in patients with immune checkpoint inhibitor-induced neurological immune-related adverse events.
The rise of cancer immunotherapy has been a milestone in clinical oncology. Above all, immune checkpoint inhibitor treatment (ICI) with monoclonal antibodies targeting programmed cell death protein 1 (PD-1), programmed cell death-ligand 1 (PD-L1), and cytotoxic T-lymphocyte-associated protein 4 (CTLA-4) has improved survival rates for an increasing number of malignancies. [...]

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2024-01-18
14:55
[DZNE-2024-00085] Dataset
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Dataset: Sub-millimeter bSSFP BOLD-fMRI accelerated with 3D stack-of-spirals at 9.4 T
Zenodo () [10.5281/zenodo.8356993]
This work aims to improve the speed of balanced steady-state free precession (bSSFP) acquisition with segmented 3D stack-of-spirals for functional brain studies at 9.4 T (see protocols.zip). Functional experiments were performed with full-field flickering checkerboard pattern (see radial_checkerboard.zip). [...]

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2024-01-18
14:52
[DZNE-2024-00084] Dataset
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Dataset: Co-condensation of proteins with single- and double-stranded DNA. Source Data
Zenodo () [10.5281/zenodo.6241150]
Source data for: Co-condensation of proteins with single- and double-stranded DNA, PNAS, 2022

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