001     155338
005     20210720115131.0
024 7 _ |a 10.1038/nature12787
|2 doi
024 7 _ |a pmid:24670763
|2 pmid
024 7 _ |a pmc:PMC5215096
|2 pmc
024 7 _ |a 0028-0836
|2 ISSN
024 7 _ |a 1476-4687
|2 ISSN
037 _ _ |a DZNE-2021-00605
041 _ _ |a English
082 _ _ |a 500
100 1 _ |a Andersson, Robin
|b 0
245 _ _ |a An atlas of active enhancers across human cell types and tissues.
260 _ _ |a London [u.a.]
|c 2014
|b Nature Publ. Group
336 7 _ |a article
|2 DRIVER
336 7 _ |a Output Types/Journal article
|2 DataCite
336 7 _ |a Journal Article
|b journal
|m journal
|0 PUB:(DE-HGF)16
|s 1626774577_22306
|2 PUB:(DE-HGF)
336 7 _ |a ARTICLE
|2 BibTeX
336 7 _ |a JOURNAL_ARTICLE
|2 ORCID
336 7 _ |a Journal Article
|0 0
|2 EndNote
520 _ _ |a Enhancers control the correct temporal and cell-type-specific activation of gene expression in multicellular eukaryotes. Knowing their properties, regulatory activity and targets is crucial to understand the regulation of differentiation and homeostasis. Here we use the FANTOM5 panel of samples, covering the majority of human tissues and cell types, to produce an atlas of active, in vivo-transcribed enhancers. We show that enhancers share properties with CpG-poor messenger RNA promoters but produce bidirectional, exosome-sensitive, relatively short unspliced RNAs, the generation of which is strongly related to enhancer activity. The atlas is used to compare regulatory programs between different cells at unprecedented depth, to identify disease-associated regulatory single nucleotide polymorphisms, and to classify cell-type-specific and ubiquitous enhancers. We further explore the utility of enhancer redundancy, which explains gene expression strength rather than expression patterns. The online FANTOM5 enhancer atlas represents a unique resource for studies on cell-type-specific enhancers and gene regulation.
588 _ _ |a Dataset connected to CrossRef, PubMed, , Journals: pub.dzne.de
650 _ 7 |a RNA, Messenger
|2 NLM Chemicals
650 _ 2 |a Atlases as Topic
|2 MeSH
650 _ 2 |a Cell Line
|2 MeSH
650 _ 2 |a Cells, Cultured
|2 MeSH
650 _ 2 |a Cluster Analysis
|2 MeSH
650 _ 2 |a Enhancer Elements, Genetic: genetics
|2 MeSH
650 _ 2 |a Gene Expression Regulation: genetics
|2 MeSH
650 _ 2 |a Genetic Predisposition to Disease: genetics
|2 MeSH
650 _ 2 |a HeLa Cells
|2 MeSH
650 _ 2 |a Humans
|2 MeSH
650 _ 2 |a Molecular Sequence Annotation
|2 MeSH
650 _ 2 |a Organ Specificity
|2 MeSH
650 _ 2 |a Polymorphism, Single Nucleotide: genetics
|2 MeSH
650 _ 2 |a Promoter Regions, Genetic: genetics
|2 MeSH
650 _ 2 |a RNA, Messenger: biosynthesis
|2 MeSH
650 _ 2 |a RNA, Messenger: genetics
|2 MeSH
650 _ 2 |a Transcription Initiation Site
|2 MeSH
650 _ 2 |a Transcription Initiation, Genetic
|2 MeSH
700 1 _ |a Gebhard, Claudia
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773 _ _ |a 10.1038/nature12787
|g Vol. 507, no. 7493, p. 455 - 461
|0 PERI:(DE-600)1413423-8
|n 7493
|p 455 - 461
|t Nature
|v 507
|y 2014
|x 1476-4687
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