Software

MEmilio implements various models for infectious disease dynamics, from simple compartmental (ODE) models through Integro-Differential equation-based (IDE) models (sometimes also denoted 'age of infection models') to agent- or individual-based models (ABMs). Its modular design allows the combination of different models with different mobility patterns. [...]

Is supplement to: Software: https://github.com/mrphysics-bonn/AxonDiameter/tree/mrm_v1.2 (URL)

New features: Added extended in-app documentation for each step Added OpenMonkeyStudio support Added 3D Feature extraction Errors: Caught some errors when starting but not finishing Refinement GUI: Recovered Feature extraction step in sidebar to avoid confusion when uploading data and auto refresh is missing Updated Menu step 5 to show correct image CleanUp: restructured feature extraction code to split functions from extractor class (some redundancy remains) split prediction from feature extraction started to remove old code What's Changed Raised streamlit version and fixed experimental_rerun to rerun to avo… by @JensBlack in https://github.com/YttriLab/A-SOID/pull/62 Updated In-App Documentation and OpenMonkeyStudio support by @JensBlack in https://github.com/YttriLab/A-SOID/pull/66 Full Changelog: https://github.com/YttriLab/A-SOID/compare/v0.3.0-natmeth...v0.3.1SUP to: https://github.com/YttriLab/A-SOID/tree/v0.3.1

MEmilio implements various models for infectious disease dynamics, from simple compartmental (ODE) models through Integro-Differential equation-based (IDE) models (sometimes also denoted 'age of infection models') to agent- or individual-based models (ABMs). Its modular design allows the combination of different models with different mobility patterns. [...]

FastSurfer 2.2.0 Merry X-mas Release! Happy to be able to give to you a new and shiny FastSurfer release. We highly recommend users to upgrade to this release as it fixes the eTIV issue (see #378) which has been around since FastSurfer v1.1.0 [...]

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JEMRIS is a general MRI simulation framework.The general process of simulation consists of preparation by choice or implementation of sequence, sample and coil setup and the invocation of the simulation run itself..

A Python data processing pipeline for high-throughput production of monoclonal antibodies

A Python data processing pipeline for automated human induced pluripotent stem cells (hiPSCs) expansion and differentiation

Python implementation of Fisher's permutation test, with an extension for error propagation. A detailed description is found on the Github page (see links on the right) [...]