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000164441 037__ $$aDZNE-2022-00993
000164441 041__ $$aEnglish
000164441 082__ $$a570
000164441 1001_ $$aMieskes, Frank$$b0
000164441 245__ $$aTrajectory data of antero- and retrograde movement of mitochondria in living zebrafish larvae.
000164441 260__ $$aAmsterdam [u.a.]$$bElsevier$$c2020
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000164441 520__ $$aRecently, a large number of single particle tracking (SPT) approaches have been developed. Generally, SPT techniques can be split into two groups: ex post facto approaches where trajectory extraction is carried out after data acquisition and feedback based approaches that perform particle tracking in real time [1]. One feedback approach is 3D Orbital Tracking, where the laser excitation beam is rotated in a circle about the object, generating a so called orbit [2,3]. By calculating the particle position from the detected intensity after every orbit in relation to its center, this method allows the microscope to follow a single object in real time. The high spatiotemporal resolution of this method and the potential to optically manipulate the followed object during the measurement promises to yield new deep insights into biological systems [4-7]. By upgrading this approach in a way that the specimen is recentered by a xy-stage on the center of the microscope, particle tracking with this long-range tracking feature is no longer limited to the covered field-of-view. This allows for the observation of mitochondrial trafficking in living zebrafish embryos over long distances. Here, we provide the raw data for antero- and retrograde movement of mitochondria labelled with photo-activatable green fluorescent protein (mitoPAGFP). It relates to the scientific article 'Nanoresolution real-time 3D orbital tracking for studying mitochondrial trafficking in vertebrate axons in vivo' [8]. By applying a correlation analysis on the trajectories, it is possible to distinguish between active transport and pausing events with less biasing compared to the mean squared displacement approach.
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000164441 650_7 $$2Other$$aFluorescence
000164441 650_7 $$2Other$$aMitochondria trafficking
000164441 650_7 $$2Other$$aOrbital tracking
000164441 650_7 $$2Other$$aSingle particle tracking
000164441 650_7 $$2Other$$aTransport
000164441 7001_ $$aWehnekamp, Fabian$$b1
000164441 7001_ $$0P:(DE-2719)9000910$$aPlucińska, Gabriela$$b2$$udzne
000164441 7001_ $$0P:(DE-2719)9000912$$aThong, Rachel$$b3$$udzne
000164441 7001_ $$0P:(DE-2719)2810727$$aMisgeld, Thomas$$b4$$udzne
000164441 7001_ $$aLamb, Don C$$b5
000164441 773__ $$0PERI:(DE-600)2786545-9$$a10.1016/j.dib.2020.105280$$gVol. 29, p. 105280 -$$p105280$$tData in Brief$$v29$$x2352-3409$$y2020
000164441 7870_ $$0DZNE-2020-07081$$aWehnekamp, Fabian et.al.$$dCambridge : eLife Sciences Publications, 2019$$iRelatedTo$$r$$tNanoresolution real-time 3D orbital tracking for studying mitochondrial trafficking in vertebrate axons in vivo.
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