Publications Database

MEmilio implements various models for infectious disease dynamics, from simple compartmental (ODE) models through Integro-Differential equation-based (IDE) models (sometimes also denoted 'age of infection models') to agent- or individual-based models (ABMs). Its modular design allows the combination of different models with different mobility patterns. [...]

These are the data sets and plasmid sequences of the viral vectors used in the study 'Mitochondrial oxidant stress promotes alpha-synuclein aggregation and spreading in mice with mutated glucocerebrosidase'

Supportive data for the eLife version of record. (1) Data used for the Michaelis Menten Kinetics. [...]

jemris (2.9-2) stable; urgency=low Major support of sundials library 6.4 (no backward compatibility with older versions) Minor improved test metrics for unit tests (sanityck) Minor bug fixes Minor updated documentation

cyCONDOR 0.2.1 changelog Included help function to assign metaclusters (Thanks to Lucas Secchim Ribeiro) Removal of redundant color_palette parameter and other redundant lines in the source code Added turkey hsd as post-hoc test to frequency_anova_test (see issue #10) Modified emmeans test in frequency_anova_test (see issue #10) Improvement of error messages

Correction to: Nature Neuroscience https://doi.org/10.1038/s41593-024-01806-0, published online 3 December 2024.In the version of this article initially published, the given name and surname of Gonçalo Castelo-Branco were interchanged, while Omer Ali Bayraktar’s surname was missing “Ali”; the names are now amended in the HTML and PDF versions of the article..

Obesity, a pandemic, worldwide afflicts almost one billion people. Obesity and ageing share several pathological pathways leading to neurological disorders. [...]

We propose a new model class aimed at predicting dynamical trajectories from highdimensional empirical data. This is done by combining variational autoencodersand (spatio-)temporal transformers within a framework designed to enforce certainscientifically-motivated invariances. [...]

Regularized regression models are well studied and, under appropriate conditions, offerfast and statistically interpretable results. However, large data in many applications areheterogeneous in the sense of harboring distributional differences between latent groups.Then, the assumption that the conditional distribution of response Y given features X is thesame for all samples may not hold. [...]