Publications Database

Python scripts related to a publication 'Centrosomal Microtubule Nucleation Regulates Radial Migration of Projection Neurons Independently of Polarization in the Developing Brain'..

In developing vertebrate neurons, a neurite is formed by more than a hundred microtubules. While individual microtubules are dynamic, the microtubule array has been regarded as stationary. [...]

Training checkpoints for VINNA4neonates (https://github.com/Deep-MI/VINNA4neonates) - please cite the paper when using this resource (https://arxiv.org/abs/2311.17546)..

MEmilio implements various models for infectious disease dynamics, from simple compartmental (ODE) models through Integro-Differential equation-based (IDE) models (sometimes also denoted 'age of infection models') to agent- or individual-based models (ABMs). Its modular design allows the combination of different models with different mobility patterns. [...]

DrugDIFF is a latent diffusion model that uses predictor guidance to generate small molecules with desired molecular properties..

hCoCena is an R-package that allows you to integrate and jointly analyse multiple transcriptomic datasets or simply analyse a single dataset. hCoCena uses network representations of the data as the basis for integration overcoming technology-specific variances. [...]

hCoCena is an R-package that allows you to integrate and jointly analyse multiple transcriptomic datasets or simply analyse a single dataset if you don't want to do any data integration! hCoCena uses network representations of the data as the basis for integration. You can find more details in the wiki our GitHub repo ( MarieOestreich/hCoCena (github.com) )..

Time and space form an integral part of every human experience, and for the neuronal representation of these perceptual dimensions, previous studies point to the involvement of the right-hemispheric intraparietal sulcus and structures in the medial temporal lobe. Here we used multi-voxel pattern analysis (MVPA) to investigate long-term memory traces for temporal and spatial stimulus features in those areas. [...]

Research into magnetic resonance imaging (MRI)-visible perivascular spaces (PVS) has recently increased, as results from studies in different diseases and populations are cementing their association with sleep, disease phenotypes, and overall health indicators. With the establishment of worldwide consortia and the availability of large databases, computational methods that allow to automatically process all this wealth of information are becoming increasingly relevant. [...]

Important health differences exist in the context of international migration and residential mobility. Less is known about health differences regarding the medium-distance level of internal migration. [...]