Journal Article DZNE-2022-00033

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Sirtuin-1 sensitive lysine-136 acetylation drives phase separation and pathological aggregation of TDP-43.

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2022
Nature Publishing Group UK [London]

Nature Communications 13(1), 1223 () [10.1038/s41467-022-28822-7]

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Abstract: Trans-activation response DNA-binding protein of 43 kDa (TDP-43) regulates RNA processing and forms neuropathological aggregates in patients with amyotrophic lateral sclerosis and frontotemporal lobar degeneration. Investigating TDP-43 post-translational modifications, we discovered that K84 acetylation reduced nuclear import whereas K136 acetylation impaired RNA binding and splicing capabilities of TDP-43. Such failure of RNA interaction triggered TDP-43 phase separation mediated by the C-terminal low complexity domain, leading to the formation of insoluble aggregates with pathologically phosphorylated and ubiquitinated TDP-43. Introduction of acetyl-lysine at the identified sites via amber suppression confirmed the results from site-directed mutagenesis. K84-acetylated TDP-43 showed cytoplasmic mislocalization, and the aggregation propensity of K136-acetylated TDP-43 was confirmed. We generated antibodies selective for TDP-43 acetylated at these lysines, and found that sirtuin-1 can potently deacetylate K136-acetylated TDP-43 and reduce its aggregation propensity. Thus, distinct lysine acetylations modulate nuclear import, RNA binding and phase separation of TDP-43, suggesting regulatory mechanisms for TDP-43 pathogenesis.

Keyword(s): Acetylation (MeSH) ; Amyotrophic Lateral Sclerosis: metabolism (MeSH) ; DNA-Binding Proteins: metabolism (MeSH) ; Humans (MeSH) ; Lysine: metabolism (MeSH) ; Protein Aggregation, Pathological: metabolism (MeSH) ; Protein Processing, Post-Translational (MeSH) ; RNA: metabolism (MeSH) ; Sirtuin 1: genetics (MeSH) ; Sirtuin 1: metabolism (MeSH)

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Contributing Institute(s):
  1. Parkinson Genetics (AG Gasser 1)
  2. Functional Neurogenetics (AG Kahle 2)
  3. iMed Translational Biomarker Research (AG Gloeckner 2)
  4. Antibody production (AG Feederle)
  5. Cell Biology of Neurologic Diseases (AG Jucker)
  6. Molecular Neuropathology of Neurodegenerative Diseases (AG Neumann)
Research Program(s):
  1. 353 - Clinical and Health Care Research (POF4-353) (POF4-353)
  2. 352 - Disease Mechanisms (POF4-352) (POF4-352)

Appears in the scientific report 2022
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Medline ; Creative Commons Attribution CC BY (No Version) ; DOAJ ; OpenAccess ; Article Processing Charges ; BIOSIS Previews ; Biological Abstracts ; Clarivate Analytics Master Journal List ; Current Contents - Agriculture, Biology and Environmental Sciences ; Current Contents - Life Sciences ; Current Contents - Physical, Chemical and Earth Sciences ; DOAJ Seal ; Essential Science Indicators ; Fees ; IF >= 15 ; JCR ; SCOPUS ; Science Citation Index Expanded ; Web of Science Core Collection ; Zoological Record
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Document types > Articles > Journal Article
Institute Collections > TÜ DZNE > TÜ DZNE-AG Gloeckner
Institute Collections > TÜ DZNE > TÜ DZNE-AG Kahle
Institute Collections > TÜ DZNE > TÜ DZNE-AG Neumann
Institute Collections > TÜ DZNE > TÜ DZNE-AG Jucker
Institute Collections > TÜ DZNE > TÜ DZNE-AG Gasser
Institute Collections > M DZNE > M DZNE-AG Feederle
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Dataset: Mapping of TDP-43 ubiquitination and acetylation sites
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 Record created 2022-03-22, last modified 2023-09-15


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