Journal Article DZNE-2023-01109

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A multi-omics dataset for the analysis of frontotemporal dementia genetic subtypes.

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2023
Nature Publ. Group London

Scientific data 10(1), 849 () [10.1038/s41597-023-02598-x]

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Abstract: Understanding the molecular mechanisms underlying frontotemporal dementia (FTD) is essential for the development of successful therapies. Systematic studies on human post-mortem brain tissue of patients with genetic subtypes of FTD are currently lacking. The Risk and Modyfing Factors of Frontotemporal Dementia (RiMod-FTD) consortium therefore has generated a multi-omics dataset for genetic subtypes of FTD to identify common and distinct molecular mechanisms disturbed in disease. Here, we present multi-omics datasets generated from the frontal lobe of post-mortem human brain tissue from patients with mutations in MAPT, GRN and C9orf72 and healthy controls. This data resource consists of four datasets generated with different technologies to capture the transcriptome by RNA-seq, small RNA-seq, CAGE-seq, and methylation profiling. We show concrete examples on how to use the resulting data and confirm current knowledge about FTD and identify new processes for further investigation. This extensive multi-omics dataset holds great value to reveal new research avenues for this devastating disease.

Keyword(s): Humans (MeSH) ; Frontal Lobe (MeSH) ; Frontotemporal Dementia: genetics (MeSH) ; Multiomics (MeSH) ; Mutation (MeSH)

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Contributing Institute(s):
  1. Genome Biology of Neurodegenerative Diseases (AG Heutink)
  2. Applied Genomics for Neurodegenerative Diseases (AG Rizzu)
  3. Epigenetics and Systems Medicine in Neurodegenerative Diseases (AG Fischer)
  4. Cell Biology of Neurological Diseases (AG Jucker)
  5. Molecular Neuropathology of Neurodegenerative Diseases (AG Neumann)
Research Program(s):
  1. 354 - Disease Prevention and Healthy Aging (POF4-354) (POF4-354)
  2. 352 - Disease Mechanisms (POF4-352) (POF4-352)

Appears in the scientific report 2023
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Medline ; Creative Commons Attribution CC BY 4.0 ; DOAJ ; OpenAccess ; Article Processing Charges ; BIOSIS Previews ; Biological Abstracts ; Clarivate Analytics Master Journal List ; DOAJ Seal ; Essential Science Indicators ; Fees ; IF >= 5 ; JCR ; PubMed Central ; SCOPUS ; Science Citation Index Expanded ; Web of Science Core Collection
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Document types > Articles > Journal Article
Institute Collections > GÖ DZNE > GÖ DZNE-AG Fischer
Institute Collections > TÜ DZNE > TÜ DZNE-AG Neumann
Institute Collections > TÜ DZNE > TÜ DZNE-AG Heutink
Institute Collections > TÜ DZNE > TÜ DZNE-AG Jucker
Institute Collections > TÜ DZNE > TÜ DZNE-AG Rizzu
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 Record created 2023-12-04, last modified 2024-01-12


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