Preprint DZNE-2025-00068

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PinkyCaMP a mScarlet-based calcium sensor with exceptional brightness, photostability, and multiplexing capabilities

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2024

bioRxiv () [10.1101/2024.12.16.628673]

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Abstract: Genetically encoded calcium (Ca2+) indicators (GECIs) are widely used for imaging neuronal activity, yet current limitations of existing red fluorescent GECIs have constrained their applicability. The inherently dim fluorescence and low signal-to-noise ratio of red-shifted GECIs have posed significant challenges. More critically, several red-fluorescent GECIs exhibit photoswitching when exposed to blue light, thereby limiting their applicability in all-optical experimental approaches. Here, we present the development of PinkyCaMP, the first mScarlet-based Ca2+ sensor that outperforms current red fluorescent sensors in brightness, photostability, signal-to-noise ratio, and compatibility with optogenetics and neurotransmitter imaging. PinkyCaMP is well-tolerated by neurons, showing no toxicity or aggregation, both in vitro and in vivo. All imaging approaches, including single-photon excitation methods such as fiber photometry, widefield imaging, miniscope imaging, as well as two-photon imaging in awake mice, are fully compatible with PinkyCaMP.


Contributing Institute(s):
  1. Neural Circuit Computations (AG Gründemann)
  2. Neuroimmunology and Imaging (AG Fuhrmann)
  3. Network Dysfunction (AG Schmitz)
Research Program(s):
  1. 351 - Brain Function (POF4-351) (POF4-351)

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The record appears in these collections:
Institute Collections > BN DZNE > BN DZNE-AG Gründemann
Institute Collections > BN DZNE > BN DZNE-AG Fuhrmann
Institute Collections > B DZNE > B DZNE-AG Schmitz
Document types > Reports > Preprints
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 Record created 2025-01-12, last modified 2025-01-19



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